Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904444.1_cds_XP_016454600.1_48609
CDS Infomation

[gene=LOC107778804] [db_xref=GeneID:107778804] [protein=protein ASPARTIC PROTEASE IN GUARD CELL 1-like] [protein_id=XP_016454600.1] [location=30917..32383] [gbkey=CDS]
Sequence

ATGGCCACTTCCAATTCCACTTCCTCCATTTTCTTCCTTGTTCTGTTATTCGTCACAGCT
CTTTCACGTACAACTCCAGATGCTTCAAGAACAACATTTCTTAGCGTTCCATCCTCCATT
CAAAAAACCCTGAACCCGTTCTCAGTGGATTCATCTCAAGCTGTAAAATCACTAAAACAA
GATGAAAATGTCATTTCTACGTCATCGTCTTCTTCGCTGAGTCTTCAACTGCATTCTCGA
GTATCAGTACGTGGTACTTCACATAGAGATTACAACTCACTTACACTAGCTCGACTGGAG
CGTGACTCAGCTCGAGTCAAATCGCTTCAAACTCGTGTAGATCTGGTTGTACAACGGATT
ACTAAATCGGATCTTAAACCGGTTGAAGTCGAGTTTCAAGCCGAGGAATTGGAAGGGCCG
ATTATTTCAGGGACTAGTCAAGGAAGCGGCGAGTATTTCTCACGAATTGGCATCGGTCAC
CCGCCAAATCAAGTTTATATGGTGCTCGATACTGGAAGTGACGTGAACTGGATCCAGTGT
GCGCCTTGCGCTGATTGTTACCAGCAAGCCGATCCGATTTTTGAGCCGGCTTCGTCTTCT
ACATTTTCGCCGCTCACTTGTGATACAAAGCAGTGCCAATCGCTTGATGTTTCTGAATGT
AGGAACGACACGTGCCTTTATGAGGTCTCCTACGGCGATGGCTCGTACACCGTTGGCGAT
TTTGTGACGGAAAGAGTTACCTTTGGAGGCTCTGCTTCGGTTGAGAATGTAGCTATCGGA
TGTGGACATAATAACGAAGGTTTATTCGTCGGCGCCGCTGGATTGTTAGGTCTCGGCGGC
GGCGCGTTATCATTTCCTTCACAGATTAATGCTTCTTCTTTCTCTTATTGCTTAGTGGAT
CGTGACTCGGACTCGACGTCAACTCTCGAGTTCGGCGGAGTGATATCGCCAGACGCCGTG
ACTGCTCCGTTAATCCGGAATTCGAAGCTCGACACATTCTATTACCTGGAATTAACGGGA
CTCAGCGTCGCGGGGAATTTGCTTTCAGTTCCTCCGTCAGCTTTCAAAGTGAGCGATAAC
GGCGACGGCGGCGTGATTATCGATTCCGGAACGGCGGTGACGAGGCTTCAGACGGACGTG
TACAACACGCTCCGTGACGAGTTCGTGAAAGGAACGAGGCACTTGCCGTCAACTAACAGC
GTGGCGTTATTCGACACATGCTATGATTTGAAATCGATGAAAAGCGTGGAAGTTCCAACG
GTGTCGTTTCATTTCTCTAACGGGAAAGAGTTACCGTTACCGGCTAAAAATTACCTGATA
CCGGTTGATTCGTCGGGAACTTTCTGTTTCGCTTTTGCTCCAACGTCGTCATCGCTGTCA
ATTATCGGTAATGTTCAACAGCAGGGGACACGTGTCAGTTTCGACCTGAAAAACTCTCTC
ATTGGATTCTCTTCCAATAAATGCTAG

Peptide Sequence

PEP ID

XP_016454600.1
PEP Infomation

PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Nicotiana tabacum]
Sequence

MATSNSTSSIFFLVLLFVTALSRTTPDASRTTFLSVPSSIQKTLNPFSVDSSQAVKSLKQ
DENVISTSSSSSLSLQLHSRVSVRGTSHRDYNSLTLARLERDSARVKSLQTRVDLVVQRI
TKSDLKPVEVEFQAEELEGPIISGTSQGSGEYFSRIGIGHPPNQVYMVLDTGSDVNWIQC
APCADCYQQADPIFEPASSSTFSPLTCDTKQCQSLDVSECRNDTCLYEVSYGDGSYTVGD
FVTERVTFGGSASVENVAIGCGHNNEGLFVGAAGLLGLGGGALSFPSQINASSFSYCLVD
RDSDSTSTLEFGGVISPDAVTAPLIRNSKLDTFYYLELTGLSVAGNLLSVPPSAFKVSDN
GDGGVIIDSGTAVTRLQTDVYNTLRDEFVKGTRHLPSTNSVALFDTCYDLKSMKSVEVPT
VSFHFSNGKELPLPAKNYLIPVDSSGTFCFAFAPTSSSLSIIGNVQQQGTRVSFDLKNSL
IGFSSNKC

Transcript Sequence

Gene sequence data has not been registered.